STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ESCO_00530837S ribosomal protein mrp21. (134 aa)    
Predicted Functional Partners:
ESCO_003602
54S ribosomal protein L16; Belongs to the universal ribosomal protein uL16 family.
   
   0.956
ESCO_002185
30S ribosomal protein S15.
   
 
 0.935
ESCO_003543
37S ribosomal protein RSM18.
   
 
 0.930
ESCO_003391
37S ribosomal protein S19; Belongs to the universal ribosomal protein uS19 family.
   
 
 0.929
ESCO_005431
Mitochondrial 37S ribosomal protein S27.
   
 
 0.928
ESCO_002643
37S ribosomal protein MRP4.
   
 
 0.928
ESCO_000862
37S ribosomal protein S26.
   
 
 0.928
ESCO_001907
37S ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family.
   
 
 0.927
ESCO_005524
Homocitrate dehydratase.
   
   0.926
ESCO_005886
50S ribosomal protein L34.
   
 
 0.926
Your Current Organism:
Escovopsis weberi
NCBI taxonomy Id: 150374
Other names: ATCC 64542, E. weberi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.