STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ESCO_005000Nuclear movement protein nudC. (189 aa)    
Predicted Functional Partners:
ESCO_005251
E3 SUMO-protein ligase RanBP2.
   
 0.975
ESCO_004234
Cell cycle serine/threonine-protein kinase CDC5/MSD2.
    
 0.963
ESCO_006850
Nuclear distribution protein PAC1.
   
 0.927
ESCO_001540
Nuclear distribution protein nudE-like protein 1.
     
 0.852
ESCO_000295
Dynein light chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in changing or maintaining the spatial distribution of cytoskeletal structures.
     
 0.779
ESCO_004118
Uncharacterized protein.
    
 0.771
ESCO_005321
Spindle assembly checkpoint component MAD1.
    
  0.752
ESCO_002196
Exportin-1.
   
 
  0.739
ESCO_000805
Dynactin subunit 1.
     
 0.735
ESCO_003335
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
     
 0.733
Your Current Organism:
Escovopsis weberi
NCBI taxonomy Id: 150374
Other names: ATCC 64542, E. weberi
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