STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDY08782.1Uncharacterized OsmC-related protein. (127 aa)    
Predicted Functional Partners:
SDY19601.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
  0.716
SDZ58856.1
Pyruvate ferredoxin oxidoreductase alpha subunit.
    
  0.690
SDZ53581.1
2,4-dienoyl-CoA reductase.
  
 
 0.634
SDY08744.1
Predicted arabinose efflux permease, MFS family.
       0.586
SDY57317.1
Dihydrolipoamide dehydrogenase.
    
 0.549
SDY78302.1
Dihydrolipoamide dehydrogenase.
    
 0.549
SDY57770.1
methylmalonyl-CoA mutase, C-terminal domain.
    
  0.506
SDY57384.1
2-oxoisovalerate dehydrogenase E1 component beta subunit.
    
  0.500
SDY78377.1
Pyruvate dehydrogenase E1 component beta subunit.
    
  0.500
SDY57351.1
2-oxoisovalerate dehydrogenase E1 component alpha subunit.
    
  0.495
Your Current Organism:
Bacillus caseinilyticus
NCBI taxonomy Id: 1503961
Other names: B. caseinilyticus, Bacillus caseinilyticus Reddy et al. 2015, Bacillus sp. SP, JCM 30246, MCC 2612, strain SP
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.