STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDY18997.1TRAP transporter, DctM subunit. (427 aa)    
Predicted Functional Partners:
SDY19042.1
TRAP-type C4-dicarboxylate transport system, small permease component.
 
 0.987
SDY19080.1
Tripartite ATP-independent transporter solute receptor, DctP family.
 
 0.972
SDZ42500.1
TRAP-type C4-dicarboxylate transport system, small permease component.
 
 0.957
SDX99294.1
TRAP-type C4-dicarboxylate transport system, small permease component.
 
 0.951
SDY54756.1
C4-dicarboxylate-binding protein DctP.
 
 0.937
SDZ60699.1
Tripartite ATP-independent transporter solute receptor, DctP family.
 
 0.910
SDZ42541.1
Tripartite ATP-independent transporter solute receptor, DctP family.
 
 0.891
SDX99253.1
TRAP-type C4-dicarboxylate transport system, substrate-binding protein.
 
 0.888
SDZ60679.1
TRAP-type C4-dicarboxylate transport system, small permease component.
 
 0.841
SDY18962.1
L-gulonate 5-dehydrogenase.
    
  0.790
Your Current Organism:
Bacillus caseinilyticus
NCBI taxonomy Id: 1503961
Other names: B. caseinilyticus, Bacillus caseinilyticus Reddy et al. 2015, Bacillus sp. SP, JCM 30246, MCC 2612, strain SP
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.