STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDY46147.1Predicted arabinose efflux permease, MFS family. (391 aa)    
Predicted Functional Partners:
SDY46230.1
ABC-2 type transport system permease protein.
 
     0.717
SDY46187.1
ABC-2 type transport system ATP-binding protein.
    
  0.683
SDZ49292.1
Hypothetical protein.
  
 
 0.673
SDZ30493.1
5-methyltetrahydrofolate--homocysteine methyltransferase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
   
 
  0.607
SDZ03080.1
Thioredoxin.
  
 
   0.544
SDZ64293.1
DNA-binding transcriptional regulator, ArsR family.
  
     0.535
SDY46099.1
Histidine triad (HIT) family protein.
       0.529
SDY89005.1
HEAT repeat-containing protein.
  
     0.514
SDZ22941.1
Oxidoreductase alpha (molybdopterin) subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
  
  0.513
SDY03694.1
MotA/TolQ/ExbB proton channel family protein.
  
     0.505
Your Current Organism:
Bacillus caseinilyticus
NCBI taxonomy Id: 1503961
Other names: B. caseinilyticus, Bacillus caseinilyticus Reddy et al. 2015, Bacillus sp. SP, JCM 30246, MCC 2612, strain SP
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.