Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SDY56851.1 | SDY56975.1 | SAMN05421736_102291 | SAMN05421736_102295 | DNA repair protein RecN (Recombination protein N); May be involved in recombinational repair of damaged DNA. | Two-component system, response regulator, stage 0 sporulation protein A. | 0.448 |
| SDY56851.1 | argR | SAMN05421736_102291 | SAMN05421736_102290 | DNA repair protein RecN (Recombination protein N); May be involved in recombinational repair of damaged DNA. | Transcriptional regulator of arginine metabolism; Regulates arginine biosynthesis genes. | 0.730 |
| SDY56975.1 | SDY56851.1 | SAMN05421736_102295 | SAMN05421736_102291 | Two-component system, response regulator, stage 0 sporulation protein A. | DNA repair protein RecN (Recombination protein N); May be involved in recombinational repair of damaged DNA. | 0.448 |
| SDY56975.1 | argR | SAMN05421736_102295 | SAMN05421736_102290 | Two-component system, response regulator, stage 0 sporulation protein A. | Transcriptional regulator of arginine metabolism; Regulates arginine biosynthesis genes. | 0.642 |
| SDY61275.1 | SDZ23176.1 | SAMN05421736_102412 | SAMN05421736_10835 | Argininosuccinate lyase. | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | 0.943 |
| SDY61275.1 | argB | SAMN05421736_102412 | SAMN05421736_10839 | Argininosuccinate lyase. | Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | 0.951 |
| SDY61275.1 | argC | SAMN05421736_102412 | SAMN05421736_10841 | Argininosuccinate lyase. | N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. | 0.902 |
| SDY61275.1 | argG | SAMN05421736_102412 | SAMN05421736_10834 | Argininosuccinate lyase. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.980 |
| SDY61275.1 | argJ | SAMN05421736_102412 | SAMN05421736_10840 | Argininosuccinate lyase. | Glutamate N-acetyltransferase / amino-acid N-acetyltransferase; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family. | 0.907 |
| SDY61275.1 | argR | SAMN05421736_102412 | SAMN05421736_102290 | Argininosuccinate lyase. | Transcriptional regulator of arginine metabolism; Regulates arginine biosynthesis genes. | 0.766 |
| SDZ23176.1 | SDY61275.1 | SAMN05421736_10835 | SAMN05421736_102412 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Argininosuccinate lyase. | 0.943 |
| SDZ23176.1 | argB | SAMN05421736_10835 | SAMN05421736_10839 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | 0.998 |
| SDZ23176.1 | argC | SAMN05421736_10835 | SAMN05421736_10841 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. | 0.994 |
| SDZ23176.1 | argG | SAMN05421736_10835 | SAMN05421736_10834 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.996 |
| SDZ23176.1 | argH | SAMN05421736_10835 | SAMN05421736_10833 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Argininosuccinate lyase. | 0.992 |
| SDZ23176.1 | argJ | SAMN05421736_10835 | SAMN05421736_10840 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Glutamate N-acetyltransferase / amino-acid N-acetyltransferase; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family. | 0.995 |
| SDZ23176.1 | argR | SAMN05421736_10835 | SAMN05421736_102290 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Transcriptional regulator of arginine metabolism; Regulates arginine biosynthesis genes. | 0.838 |
| argB | SDY61275.1 | SAMN05421736_10839 | SAMN05421736_102412 | Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | Argininosuccinate lyase. | 0.951 |
| argB | SDZ23176.1 | SAMN05421736_10839 | SAMN05421736_10835 | Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | 0.998 |
| argB | argC | SAMN05421736_10839 | SAMN05421736_10841 | Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. | 0.999 |
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