STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDY58451.1Predicted arabinose efflux permease, MFS family. (403 aa)    
Predicted Functional Partners:
SDZ30493.1
5-methyltetrahydrofolate--homocysteine methyltransferase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
   
 
  0.607
SDY92091.1
Hypothetical protein.
  
     0.527
SDY95361.1
Hypothetical protein.
  
     0.481
SDY91929.1
ABC-type glycerol-3-phosphate transport system, substrate-binding protein.
  
     0.462
SDY58386.1
Na+/melibiose symporter.
 
     0.458
SDY58421.1
Glycerophosphoryl diester phosphodiesterase.
       0.450
SDY92041.1
NHL repeat-containing protein.
  
     0.449
SDY92068.1
Yip1 domain-containing protein.
  
     0.426
SDZ49292.1
Hypothetical protein.
   
 
 0.407
SDY95288.1
NHL repeat-containing protein.
  
     0.403
Your Current Organism:
Bacillus caseinilyticus
NCBI taxonomy Id: 1503961
Other names: B. caseinilyticus, Bacillus caseinilyticus Reddy et al. 2015, Bacillus sp. SP, JCM 30246, MCC 2612, strain SP
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.