STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDY78225.1Glycine betaine transporter; Belongs to the BCCT transporter (TC 2.A.15) family. (504 aa)    
Predicted Functional Partners:
SDZ12587.1
Glycine betaine/proline transport system substrate-binding protein.
    
 0.669
SDZ12648.1
Glycine betaine/proline transport system ATP-binding protein.
     
 0.668
SDZ12613.1
Glycine betaine/proline transport system permease protein.
     
 0.614
SDY78187.1
Peptidoglycan/xylan/chitin deacetylase, PgdA/CDA1 family.
       0.520
SDY78153.1
Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contain LysM domain.
       0.498
SDY04790.1
Choline dehydrogenase.
  
 
 0.484
SDX97168.1
Sodium/proline symporter; Catalyzes the sodium-dependent uptake of extracellular L- proline; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
  
 0.429
SDY78256.1
Hypothetical protein.
       0.421
SDY34548.1
Glutamate synthase (NADPH/NADH) large chain.
      
 0.416
Your Current Organism:
Bacillus caseinilyticus
NCBI taxonomy Id: 1503961
Other names: B. caseinilyticus, Bacillus caseinilyticus Reddy et al. 2015, Bacillus sp. SP, JCM 30246, MCC 2612, strain SP
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.