STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDZ04593.1Phage shock protein A. (213 aa)    
Predicted Functional Partners:
SDZ04619.1
Lia operon protein LiaI.
 
  
 0.951
SDZ04570.1
Lia operon protein LiaF.
 
  
 0.933
SDZ34364.1
Phage shock protein PspC (stress-responsive transcriptional regulator).
  
 
 0.910
SDZ65597.1
Predicted ATPase.
   
 
 0.881
SDZ04549.1
Two-component system, NarL family, sensor histidine kinase LiaS.
 
    0.796
SDY99479.1
YpjP-like protein.
  
     0.716
SDZ53619.1
Putative membrane protein.
 
     0.703
SDZ44441.1
Hypothetical protein.
  
     0.637
SDZ19555.1
Putative amidase domain-containing protein.
  
     0.624
SDY13632.1
Hypothetical protein.
  
    0.612
Your Current Organism:
Bacillus caseinilyticus
NCBI taxonomy Id: 1503961
Other names: B. caseinilyticus, Bacillus caseinilyticus Reddy et al. 2015, Bacillus sp. SP, JCM 30246, MCC 2612, strain SP
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