STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDZ01835.1DinB superfamily protein. (154 aa)    
Predicted Functional Partners:
SDZ37547.1
Hypothetical protein.
  
     0.715
SDZ08113.1
DinB superfamily protein.
  
     0.508
SDY30502.1
RNA polymerase sigma-70 factor, ECF subfamily.
  
     0.490
SDZ04593.1
Phage shock protein A.
  
     0.487
SDZ31250.1
Uncharacterized membrane protein YesL.
  
     0.481
SDZ16807.1
Hypothetical protein.
  
     0.475
SDZ05050.1
Hypothetical protein.
  
     0.471
SDZ56277.1
Bacillopeptidase F; Belongs to the peptidase S8 family.
  
     0.465
SDY29664.1
DinB superfamily protein.
  
     0.459
SDZ01860.1
Phenazine biosynthesis protein PhzF family.
       0.456
Your Current Organism:
Bacillus caseinilyticus
NCBI taxonomy Id: 1503961
Other names: B. caseinilyticus, Bacillus caseinilyticus Reddy et al. 2015, Bacillus sp. SP, JCM 30246, MCC 2612, strain SP
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.