STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDZ37438.1Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein. (149 aa)    
Predicted Functional Partners:
SDX97664.1
Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein.
  
     0.775
birA
Bifunctional ligase/repressor BirA; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
   
 
 0.764
SDY19601.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
  0.719
SDZ58845.1
Pyruvate ferredoxin oxidoreductase gamma subunit.
    
  0.701
SDY06884.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
    
  0.690
SDY69213.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
    
  0.690
SDY01142.1
PTS system, beta-glucosides-specific IIC component.
   
 
  0.657
SDY21044.1
PTS system, beta-glucosides-specific IIC component.
   
 
  0.657
SDY22912.1
PTS system, beta-glucosides-specific IIC component.
   
 
  0.657
SDZ25894.1
PTS system, beta-glucosides-specific IIC component.
   
 
  0.657
Your Current Organism:
Bacillus caseinilyticus
NCBI taxonomy Id: 1503961
Other names: B. caseinilyticus, Bacillus caseinilyticus Reddy et al. 2015, Bacillus sp. SP, JCM 30246, MCC 2612, strain SP
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.