STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDZ51882.1Putative ABC transport system ATP-binding protein. (225 aa)    
Predicted Functional Partners:
SDZ51895.1
Putative ABC transport system permease protein.
 
  0.974
SDY67646.1
Putative ABC transport system permease protein.
  
 0.973
SDZ08288.1
Putative ABC transport system permease protein.
 
  0.904
SDZ42054.1
Putative ABC transport system permease protein.
 
  0.895
SDZ30888.1
NitT/TauT family transport system ATP-binding protein.
 
    
0.826
SDZ48776.1
Putative ABC transport system permease protein.
 
  0.823
SDY15970.1
Peptide/nickel transport system ATP-binding protein/oligopeptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
   
 
0.734
SDZ16733.1
ABC-2 type transport system ATP-binding protein.
 
  
  0.732
SDZ38974.1
Nickel transport system ATP-binding protein.
 
  
 
0.713
SDZ51922.1
Heavy metal sensor kinase.
 
 
   0.713
Your Current Organism:
Bacillus caseinilyticus
NCBI taxonomy Id: 1503961
Other names: B. caseinilyticus, Bacillus caseinilyticus Reddy et al. 2015, Bacillus sp. SP, JCM 30246, MCC 2612, strain SP
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.