STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDZ50975.1LacI family transcriptional regulator. (334 aa)    
Predicted Functional Partners:
SDY34548.1
Glutamate synthase (NADPH/NADH) large chain.
    
 
 0.823
SDZ50987.1
Hypothetical protein.
       0.705
SDY01142.1
PTS system, beta-glucosides-specific IIC component.
    
 0.678
SDY21044.1
PTS system, beta-glucosides-specific IIC component.
   
 0.678
SDY22912.1
PTS system, beta-glucosides-specific IIC component.
   
 0.678
SDZ25894.1
PTS system, beta-glucosides-specific IIC component.
   
 0.678
SDZ34051.1
PTS system, D-glucosamine-specific IIC component.
    
 0.678
SDZ38509.1
PTS system, beta-glucosides-specific IIC component.
   
 0.678
SDZ48977.1
PTS system, beta-glucosides-specific IIC component.
    
 0.678
SDZ53595.1
PTS system, beta-glucosides-specific IIC component.
    
 0.678
Your Current Organism:
Bacillus caseinilyticus
NCBI taxonomy Id: 1503961
Other names: B. caseinilyticus, Bacillus caseinilyticus Reddy et al. 2015, Bacillus sp. SP, JCM 30246, MCC 2612, strain SP
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.