STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDZ55925.1Transcriptional activator of comK gene. (331 aa)    
Predicted Functional Partners:
SDZ18457.1
Simple sugar transport system ATP-binding protein.
 
 
 0.960
SDZ18389.1
Simple sugar transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.936
SDZ18424.1
Simple sugar transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.934
SDZ55912.1
Two-component system, NtrC family, sensor histidine kinase AtoS.
 
     0.851
SDY11186.1
Ribose transport system ATP-binding protein/rhamnose transport system ATP-binding protein.
 
  
  0.604
rbsA
Ribose transport system ATP-binding protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 
  
  0.590
SDZ62821.1
Ribose transport system ATP-binding protein.
 
  
  0.585
SDZ55939.1
Phosphoglucomutase.
       0.442
SDY75700.1
Stage II sporulation protein GA (sporulation sigma-E factor processing peptidase); Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR.
   
    0.412
guaA
GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP.
     
 0.402
Your Current Organism:
Bacillus caseinilyticus
NCBI taxonomy Id: 1503961
Other names: B. caseinilyticus, Bacillus caseinilyticus Reddy et al. 2015, Bacillus sp. SP, JCM 30246, MCC 2612, strain SP
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.