STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDZ64376.1Sugar lactone lactonase YvrE. (282 aa)    
Predicted Functional Partners:
SDX99214.1
Mannonate dehydratase.
 
  
 0.713
SDY22299.1
Mannonate dehydratase.
 
  
 0.707
SDZ18724.1
Mn-containing catalase (includes spore coat protein CotJC).
  
 
  0.698
ilvD
Dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family.
    
 0.661
SDY04790.1
Choline dehydrogenase.
  
 
 0.660
SDY01466.1
Catalase; Belongs to the catalase family.
   
 
 0.659
katG
Catalase-peroxidase; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily.
     
 0.649
SDZ11502.1
Predicted dehydrogenase.
  
 
  0.644
SDY88909.1
Nicotinamidase-related amidase.
  
 
  0.637
SDY50031.1
Glycolate oxidase.
 
 
 0.593
Your Current Organism:
Bacillus caseinilyticus
NCBI taxonomy Id: 1503961
Other names: B. caseinilyticus, Bacillus caseinilyticus Reddy et al. 2015, Bacillus sp. SP, JCM 30246, MCC 2612, strain SP
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.