STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDZ68387.1Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily. (338 aa)    
Predicted Functional Partners:
SDZ39726.1
Peptide/nickel transport system permease protein.
 
 
  0.989
SDZ68368.1
Peptide/nickel transport system permease protein.
 
  0.988
SDZ61716.1
Oligopeptide transport system permease protein.
 
 0.986
SDY15926.1
Peptide/nickel transport system permease protein.
 
  0.985
SDZ67224.1
Peptide/nickel transport system permease protein.
 
  0.985
SDZ67272.1
Peptide/nickel transport system permease protein.
 
  0.985
SDZ42803.1
Peptide/nickel transport system permease protein.
 
  0.972
SDZ62539.1
Peptide/nickel transport system permease protein.
 
  0.966
SDZ38958.1
Nickel transport system permease protein.
 
  0.964
SDZ61706.1
Oligopeptide transport system permease protein.
 0.911
Your Current Organism:
Bacillus caseinilyticus
NCBI taxonomy Id: 1503961
Other names: B. caseinilyticus, Bacillus caseinilyticus Reddy et al. 2015, Bacillus sp. SP, JCM 30246, MCC 2612, strain SP
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.