STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FL83_24510Uncharacterized protein. (95 aa)    
Predicted Functional Partners:
FL83_04940
RPA_C domain-containing protein.
    
 0.592
FL83_06862
Uncharacterized protein.
    
 0.591
FL83_11614
Uncharacterized protein.
    
 0.581
FL83_22286
DIRP domain-containing protein.
    
 0.570
FL83_09758
Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage.
    
 0.548
FL83_09345
BTB domain-containing protein.
    
  0.541
FL83_18378
Uncharacterized protein.
    
 0.539
FL83_11626
WD_REPEATS_REGION domain-containing protein.
    
 0.539
FL83_19453
CRC domain-containing protein.
    
 0.536
FL83_19317
Uncharacterized protein.
    
  0.508
Your Current Organism:
Caenorhabditis latens
NCBI taxonomy Id: 1503980
Other names: C. latens, Caenorhabditis latens Felix, Braendle & Cutter, 2014, Caenorhabditis sp. 23 KK-2011
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