STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FL83_13935Uncharacterized protein. (694 aa)    
Predicted Functional Partners:
FL83_18860
Uncharacterized protein.
    
 0.998
FL83_13897
Uncharacterized protein.
    
 0.802
FL83_21221
Uncharacterized protein.
   
    0.784
FL83_21940
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
    0.759
FL83_20441
Uncharacterized protein.
    
 0.748
FL83_11738
Nop domain-containing protein.
   
    0.742
FL83_07504
NIPSNAP domain-containing protein.
   
    0.738
FL83_03762
Uncharacterized protein.
      
 0.696
FL83_08449
Uncharacterized protein.
      
 0.694
FL83_23467
Uncharacterized protein.
    
 0.692
Your Current Organism:
Caenorhabditis latens
NCBI taxonomy Id: 1503980
Other names: C. latens, Caenorhabditis latens Felix, Braendle & Cutter, 2014, Caenorhabditis sp. 23 KK-2011
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.