STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FL83_07507Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family. (1222 aa)    
Predicted Functional Partners:
FL83_10183
Integrin beta.
   
 0.999
FL83_11922
PH domain-containing protein.
   
 
 0.949
FL83_18620
ANK_REP_REGION domain-containing protein.
    
 0.941
FL83_03132
I-EGF_1 domain-containing protein.
   
 0.937
FL83_15705
Uncharacterized protein.
   
 0.920
FL83_12466
Uncharacterized protein.
   
 0.904
FL83_12465
Uncharacterized protein.
   
 0.902
FL83_04917
14_3_3 domain-containing protein; Belongs to the 14-3-3 family.
    
  0.899
FL83_01095
14_3_3 domain-containing protein; Belongs to the 14-3-3 family.
    
  0.899
FL83_14084
Uncharacterized protein.
   
 0.892
Your Current Organism:
Caenorhabditis latens
NCBI taxonomy Id: 1503980
Other names: C. latens, Caenorhabditis latens Felix, Braendle & Cutter, 2014, Caenorhabditis sp. 23 KK-2011
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.