Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CP523_02225 | CP523_02235 | GCA_900092375_00522 | GCA_900092375_00520 | Unannotated protein. | Unannotated protein. | 0.691 |
CP523_02225 | CP523_02245 | GCA_900092375_00522 | GCA_900092375_00518 | Unannotated protein. | Unannotated protein; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | 0.652 |
CP523_02225 | dnaJ | GCA_900092375_00522 | GCA_900092375_00514 | Unannotated protein. | Unannotated protein; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK [...] | 0.463 |
CP523_02225 | era | GCA_900092375_00522 | GCA_900092375_00529 | Unannotated protein. | Unannotated protein; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | 0.594 |
CP523_02225 | mtaB | GCA_900092375_00522 | GCA_900092375_00519 | Unannotated protein. | Unannotated protein. | 0.634 |
CP523_02225 | prmA | GCA_900092375_00522 | GCA_900092375_00517 | Unannotated protein. | Unannotated protein; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family. | 0.681 |
CP523_02225 | rpsU | GCA_900092375_00522 | GCA_900092375_00521 | Unannotated protein. | Unannotated protein; Belongs to the bacterial ribosomal protein bS21 family. | 0.974 |
CP523_02235 | CP523_02225 | GCA_900092375_00520 | GCA_900092375_00522 | Unannotated protein. | Unannotated protein. | 0.691 |
CP523_02235 | CP523_02245 | GCA_900092375_00520 | GCA_900092375_00518 | Unannotated protein. | Unannotated protein; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | 0.779 |
CP523_02235 | dnaJ | GCA_900092375_00520 | GCA_900092375_00514 | Unannotated protein. | Unannotated protein; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK [...] | 0.530 |
CP523_02235 | era | GCA_900092375_00520 | GCA_900092375_00529 | Unannotated protein. | Unannotated protein; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | 0.583 |
CP523_02235 | mtaB | GCA_900092375_00520 | GCA_900092375_00519 | Unannotated protein. | Unannotated protein. | 0.766 |
CP523_02235 | prmA | GCA_900092375_00520 | GCA_900092375_00517 | Unannotated protein. | Unannotated protein; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family. | 0.716 |
CP523_02235 | rpsU | GCA_900092375_00520 | GCA_900092375_00521 | Unannotated protein. | Unannotated protein; Belongs to the bacterial ribosomal protein bS21 family. | 0.735 |
CP523_02245 | CP523_02225 | GCA_900092375_00518 | GCA_900092375_00522 | Unannotated protein; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | Unannotated protein. | 0.652 |
CP523_02245 | CP523_02235 | GCA_900092375_00518 | GCA_900092375_00520 | Unannotated protein; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | Unannotated protein. | 0.779 |
CP523_02245 | CP523_14065 | GCA_900092375_00518 | GCA_900092375_03089 | Unannotated protein; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | Unannotated protein. | 0.436 |
CP523_02245 | dnaJ | GCA_900092375_00518 | GCA_900092375_00514 | Unannotated protein; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | Unannotated protein; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK [...] | 0.672 |
CP523_02245 | era | GCA_900092375_00518 | GCA_900092375_00529 | Unannotated protein; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | Unannotated protein; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | 0.536 |
CP523_02245 | mtaB | GCA_900092375_00518 | GCA_900092375_00519 | Unannotated protein; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | Unannotated protein. | 0.928 |
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