Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CP523_02170 | CP523_06450 | GCA_900092375_00533 | GCA_900092375_02167 | Unannotated protein; Belongs to the PEP-utilizing enzyme family. | Unannotated protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.919 |
CP523_02170 | CP523_07520 | GCA_900092375_00533 | GCA_900092375_01113 | Unannotated protein; Belongs to the PEP-utilizing enzyme family. | Unannotated protein. | 0.926 |
CP523_02170 | CP523_13575 | GCA_900092375_00533 | GCA_900092375_00091 | Unannotated protein; Belongs to the PEP-utilizing enzyme family. | Unannotated protein; Belongs to the pyruvate kinase family. | 0.913 |
CP523_02170 | eno | GCA_900092375_00533 | GCA_900092375_01544 | Unannotated protein; Belongs to the PEP-utilizing enzyme family. | Unannotated protein; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | 0.920 |
CP523_02170 | eno-2 | GCA_900092375_00533 | GCA_900092375_02215 | Unannotated protein; Belongs to the PEP-utilizing enzyme family. | Unannotated protein; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | 0.920 |
CP523_02170 | ldh | GCA_900092375_00533 | GCA_900092375_00010 | Unannotated protein; Belongs to the PEP-utilizing enzyme family. | Unannotated protein; Catalyzes the conversion of lactate to pyruvate. | 0.922 |
CP523_02170 | ldh-2 | GCA_900092375_00533 | GCA_900092375_00167 | Unannotated protein; Belongs to the PEP-utilizing enzyme family. | Unannotated protein; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family. | 0.922 |
CP523_02170 | nifJ | GCA_900092375_00533 | GCA_900092375_00966 | Unannotated protein; Belongs to the PEP-utilizing enzyme family. | Unannotated protein. | 0.982 |
CP523_02170 | pyk | GCA_900092375_00533 | GCA_900092375_01389 | Unannotated protein; Belongs to the PEP-utilizing enzyme family. | Unannotated protein; Belongs to the pyruvate kinase family. | 0.939 |
CP523_02170 | pyk-2 | GCA_900092375_00533 | GCA_900092375_02425 | Unannotated protein; Belongs to the PEP-utilizing enzyme family. | Unannotated protein; Belongs to the pyruvate kinase family. | 0.939 |
CP523_06450 | CP523_02170 | GCA_900092375_02167 | GCA_900092375_00533 | Unannotated protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Unannotated protein; Belongs to the PEP-utilizing enzyme family. | 0.919 |
CP523_06450 | CP523_07520 | GCA_900092375_02167 | GCA_900092375_01113 | Unannotated protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Unannotated protein. | 0.917 |
CP523_06450 | CP523_13575 | GCA_900092375_02167 | GCA_900092375_00091 | Unannotated protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Unannotated protein; Belongs to the pyruvate kinase family. | 0.928 |
CP523_06450 | ldh | GCA_900092375_02167 | GCA_900092375_00010 | Unannotated protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Unannotated protein; Catalyzes the conversion of lactate to pyruvate. | 0.931 |
CP523_06450 | ldh-2 | GCA_900092375_02167 | GCA_900092375_00167 | Unannotated protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Unannotated protein; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family. | 0.931 |
CP523_06450 | nifJ | GCA_900092375_02167 | GCA_900092375_00966 | Unannotated protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Unannotated protein. | 0.945 |
CP523_06450 | pyk | GCA_900092375_02167 | GCA_900092375_01389 | Unannotated protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Unannotated protein; Belongs to the pyruvate kinase family. | 0.960 |
CP523_06450 | pyk-2 | GCA_900092375_02167 | GCA_900092375_02425 | Unannotated protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Unannotated protein; Belongs to the pyruvate kinase family. | 0.960 |
CP523_07520 | CP523_02170 | GCA_900092375_01113 | GCA_900092375_00533 | Unannotated protein. | Unannotated protein; Belongs to the PEP-utilizing enzyme family. | 0.926 |
CP523_07520 | CP523_06450 | GCA_900092375_01113 | GCA_900092375_02167 | Unannotated protein. | Unannotated protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.917 |
page 1 of 6