STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CP523_01305Unannotated protein. (297 aa)    
Predicted Functional Partners:
rnfE
Unannotated protein; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.
 
 
 0.999
rnfG
Unannotated protein; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the RnfG family.
 
 
 0.999
CP523_01310
Unannotated protein.
 
 
 0.999
rsxA
Unannotated protein; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.
 
 
 0.998
rnfB
Unannotated protein; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
 
 
 0.997
nifJ
Unannotated protein.
   
 
 0.916
CP523_09975
Unannotated protein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein.
 
  
 0.827
CP523_08775
Unannotated protein; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.
   
 
 0.643
CP523_09990
Unannotated protein.
 
     0.518
CP523_09980
Unannotated protein.
  
   
 0.477
Your Current Organism:
Clostridium septicum
NCBI taxonomy Id: 1504
Other names: ATCC 12464, BCRC 14552, Bacillus septicus, C. septicum, CCM 5743, CCRC 14552, CCRC:14552, CCUG 4855, CIP 61.10, CN 3790, DSM 7534, JCM 8144, NCCB 47070, NCIMB 547, NCTC 547, NRRL B-3197, Vibrio septicus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.