STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CP523_01345Unannotated protein. (961 aa)    
Predicted Functional Partners:
mreC
Unannotated protein; Involved in formation and maintenance of cell shape.
 
 
 0.946
rodA
Unannotated protein; Belongs to the SEDS family.
 
 
 0.943
CP523_06420
Unannotated protein.
  
  
0.930
CP523_14860
Unannotated protein.
 
  
0.927
CP523_10585
Unannotated protein.
 
 
 0.886
CP523_14880
Unannotated protein; Belongs to the SEDS family.
 
 
 0.841
CP523_06425
Unannotated protein; Belongs to the SEDS family.
 
 
 0.821
CP523_10235
Unannotated protein.
 
 
 0.808
CP523_14885
Unannotated protein; Essential cell division protein.
 
 
 0.800
CP523_04335
Unannotated protein; Belongs to the SEDS family.
 
 
 0.787
Your Current Organism:
Clostridium septicum
NCBI taxonomy Id: 1504
Other names: ATCC 12464, BCRC 14552, Bacillus septicus, C. septicum, CCM 5743, CCRC 14552, CCRC:14552, CCUG 4855, CIP 61.10, CN 3790, DSM 7534, JCM 8144, NCCB 47070, NCIMB 547, NCTC 547, NRRL B-3197, Vibrio septicus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.