STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CP523_14775Unannotated protein; Belongs to the CoA-transferase III family. (396 aa)    
Predicted Functional Partners:
CP523_14785
Unannotated protein.
    
 0.937
CP523_14770
Unannotated protein.
 
 0.783
CP523_14780
Unannotated protein.
 
   
 0.719
hydA
Unannotated protein.
 
  
 0.623
CP523_14765
Unannotated protein.
       0.562
CP523_09560
Unannotated protein.
 
 0.521
CP523_06280
Unannotated protein; Belongs to the ATP-dependent AMP-binding enzyme family.
  
  
 0.513
accD
Unannotated protein; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family.
     
 0.506
CP523_05175
Unannotated protein.
 
 
 0.455
CP523_09555
Unannotated protein; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 
 0.444
Your Current Organism:
Clostridium septicum
NCBI taxonomy Id: 1504
Other names: ATCC 12464, BCRC 14552, Bacillus septicus, C. septicum, CCM 5743, CCRC 14552, CCRC:14552, CCUG 4855, CIP 61.10, CN 3790, DSM 7534, JCM 8144, NCCB 47070, NCIMB 547, NCTC 547, NRRL B-3197, Vibrio septicus
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.