Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CP523_03385 | CP523_03805 | GCA_900092375_00063 | GCA_900092375_01533 | Unannotated protein. | Unannotated protein. | 0.925 |
CP523_03385 | CP523_05935 | GCA_900092375_00063 | GCA_900092375_01890 | Unannotated protein. | Unannotated protein; Belongs to the MIP/aquaporin (TC 1.A.8) family. | 0.556 |
CP523_03385 | glpK | GCA_900092375_00063 | GCA_900092375_01894 | Unannotated protein. | Unannotated protein; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate. | 0.663 |
CP523_03385 | pstA | GCA_900092375_00063 | GCA_900092375_02311 | Unannotated protein. | Unannotated protein. | 0.430 |
CP523_03805 | CP523_03385 | GCA_900092375_01533 | GCA_900092375_00063 | Unannotated protein. | Unannotated protein. | 0.925 |
CP523_03805 | CP523_03810 | GCA_900092375_01533 | GCA_900092375_01534 | Unannotated protein. | Unannotated protein. | 0.782 |
CP523_03805 | CP523_03815 | GCA_900092375_01533 | GCA_900092375_01535 | Unannotated protein. | Unannotated protein. | 0.502 |
CP523_03805 | CP523_05935 | GCA_900092375_01533 | GCA_900092375_01890 | Unannotated protein. | Unannotated protein; Belongs to the MIP/aquaporin (TC 1.A.8) family. | 0.593 |
CP523_03805 | CP523_07210 | GCA_900092375_01533 | GCA_900092375_01059 | Unannotated protein. | Unannotated protein. | 0.468 |
CP523_03805 | CP523_10825 | GCA_900092375_01533 | GCA_900092375_02499 | Unannotated protein. | Unannotated protein. | 0.481 |
CP523_03805 | CP523_11130 | GCA_900092375_01533 | GCA_900092375_00914 | Unannotated protein. | Unannotated protein; Belongs to the sulfur carrier protein TusA family. | 0.624 |
CP523_03805 | glpK | GCA_900092375_01533 | GCA_900092375_01894 | Unannotated protein. | Unannotated protein; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate. | 0.730 |
CP523_03805 | ispH | GCA_900092375_01533 | GCA_900092375_00297 | Unannotated protein. | Unannotated protein; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family. | 0.483 |
CP523_03805 | pstA | GCA_900092375_01533 | GCA_900092375_02311 | Unannotated protein. | Unannotated protein. | 0.512 |
CP523_03810 | CP523_03805 | GCA_900092375_01534 | GCA_900092375_01533 | Unannotated protein. | Unannotated protein. | 0.782 |
CP523_03810 | CP523_03815 | GCA_900092375_01534 | GCA_900092375_01535 | Unannotated protein. | Unannotated protein. | 0.480 |
CP523_03810 | CP523_11130 | GCA_900092375_01534 | GCA_900092375_00914 | Unannotated protein. | Unannotated protein; Belongs to the sulfur carrier protein TusA family. | 0.674 |
CP523_03815 | CP523_03805 | GCA_900092375_01535 | GCA_900092375_01533 | Unannotated protein. | Unannotated protein. | 0.502 |
CP523_03815 | CP523_03810 | GCA_900092375_01535 | GCA_900092375_01534 | Unannotated protein. | Unannotated protein. | 0.480 |
CP523_05935 | CP523_03385 | GCA_900092375_01890 | GCA_900092375_00063 | Unannotated protein; Belongs to the MIP/aquaporin (TC 1.A.8) family. | Unannotated protein. | 0.556 |
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