Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CP523_08290 | CP523_08295 | GCA_900092375_01599 | GCA_900092375_01600 | Unannotated protein; Belongs to the class-I aminoacyl-tRNA synthetase family. | Unannotated protein. | 0.627 |
CP523_08290 | CP523_08300 | GCA_900092375_01599 | GCA_900092375_01601 | Unannotated protein; Belongs to the class-I aminoacyl-tRNA synthetase family. | Unannotated protein. | 0.588 |
CP523_08290 | ispH | GCA_900092375_01599 | GCA_900092375_00297 | Unannotated protein; Belongs to the class-I aminoacyl-tRNA synthetase family. | Unannotated protein; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family. | 0.415 |
CP523_08290 | metG | GCA_900092375_01599 | GCA_900092375_01598 | Unannotated protein; Belongs to the class-I aminoacyl-tRNA synthetase family. | Unannotated protein; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | 0.978 |
CP523_08290 | polA | GCA_900092375_01599 | GCA_900092375_02081 | Unannotated protein; Belongs to the class-I aminoacyl-tRNA synthetase family. | Unannotated protein; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.533 |
CP523_08290 | rsmA | GCA_900092375_01599 | GCA_900092375_01603 | Unannotated protein; Belongs to the class-I aminoacyl-tRNA synthetase family. | Unannotated protein; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. | 0.491 |
CP523_08295 | CP523_08290 | GCA_900092375_01600 | GCA_900092375_01599 | Unannotated protein. | Unannotated protein; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.627 |
CP523_08295 | CP523_08300 | GCA_900092375_01600 | GCA_900092375_01601 | Unannotated protein. | Unannotated protein. | 0.785 |
CP523_08295 | CP523_08325 | GCA_900092375_01600 | GCA_900092375_01606 | Unannotated protein. | Unannotated protein. | 0.536 |
CP523_08295 | CP523_08330 | GCA_900092375_01600 | GCA_900092375_01607 | Unannotated protein. | Unannotated protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family. | 0.500 |
CP523_08295 | ispH | GCA_900092375_01600 | GCA_900092375_00297 | Unannotated protein. | Unannotated protein; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family. | 0.487 |
CP523_08295 | metG | GCA_900092375_01600 | GCA_900092375_01598 | Unannotated protein. | Unannotated protein; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | 0.925 |
CP523_08295 | nnrD | GCA_900092375_01600 | GCA_900092375_02182 | Unannotated protein. | Unannotated protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epim [...] | 0.482 |
CP523_08295 | polA | GCA_900092375_01600 | GCA_900092375_02081 | Unannotated protein. | Unannotated protein; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.540 |
CP523_08295 | rnmV | GCA_900092375_01600 | GCA_900092375_01602 | Unannotated protein. | Unannotated protein; Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step. | 0.704 |
CP523_08295 | rsmA | GCA_900092375_01600 | GCA_900092375_01603 | Unannotated protein. | Unannotated protein; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. | 0.742 |
CP523_08300 | CP523_08290 | GCA_900092375_01601 | GCA_900092375_01599 | Unannotated protein. | Unannotated protein; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.588 |
CP523_08300 | CP523_08295 | GCA_900092375_01601 | GCA_900092375_01600 | Unannotated protein. | Unannotated protein. | 0.785 |
CP523_08300 | CP523_08325 | GCA_900092375_01601 | GCA_900092375_01606 | Unannotated protein. | Unannotated protein. | 0.565 |
CP523_08300 | metG | GCA_900092375_01601 | GCA_900092375_01598 | Unannotated protein. | Unannotated protein; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | 0.566 |
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