Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CP523_01795 | CP523_04895 | GCA_900092375_02392 | GCA_900092375_01697 | Unannotated protein. | Unannotated protein; Belongs to the peptidase S24 family. | 0.635 |
CP523_01795 | CP523_07210 | GCA_900092375_02392 | GCA_900092375_01059 | Unannotated protein. | Unannotated protein. | 0.406 |
CP523_01795 | CP523_13815 | GCA_900092375_02392 | GCA_900092375_02059 | Unannotated protein. | Unannotated protein. | 0.406 |
CP523_01795 | recA | GCA_900092375_02392 | GCA_900092375_00651 | Unannotated protein. | Unannotated protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.486 |
CP523_01795 | topA | GCA_900092375_02392 | GCA_900092375_02369 | Unannotated protein. | Unannotated protein; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.615 |
CP523_04895 | CP523_01795 | GCA_900092375_01697 | GCA_900092375_02392 | Unannotated protein; Belongs to the peptidase S24 family. | Unannotated protein. | 0.635 |
CP523_04895 | CP523_07210 | GCA_900092375_01697 | GCA_900092375_01059 | Unannotated protein; Belongs to the peptidase S24 family. | Unannotated protein. | 0.807 |
CP523_04895 | CP523_13815 | GCA_900092375_01697 | GCA_900092375_02059 | Unannotated protein; Belongs to the peptidase S24 family. | Unannotated protein. | 0.807 |
CP523_04895 | addB | GCA_900092375_01697 | GCA_900092375_00676 | Unannotated protein; Belongs to the peptidase S24 family. | Unannotated protein; ATP-dependent DNA helicase; Belongs to the helicase family. AddB/RexB type 1 subfamily. | 0.856 |
CP523_04895 | dinB | GCA_900092375_01697 | GCA_900092375_00491 | Unannotated protein; Belongs to the peptidase S24 family. | Unannotated protein; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII. | 0.824 |
CP523_04895 | polA | GCA_900092375_01697 | GCA_900092375_02081 | Unannotated protein; Belongs to the peptidase S24 family. | Unannotated protein; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.801 |
CP523_04895 | recA | GCA_900092375_01697 | GCA_900092375_00651 | Unannotated protein; Belongs to the peptidase S24 family. | Unannotated protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.983 |
CP523_04895 | recD2 | GCA_900092375_01697 | GCA_900092375_01438 | Unannotated protein; Belongs to the peptidase S24 family. | Unannotated protein; DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity; Belongs to the RecD family. RecD-like subfamily. | 0.808 |
CP523_04895 | recN | GCA_900092375_01697 | GCA_900092375_01264 | Unannotated protein; Belongs to the peptidase S24 family. | Unannotated protein; May be involved in recombinational repair of damaged DNA. | 0.725 |
CP523_04895 | topA | GCA_900092375_01697 | GCA_900092375_02369 | Unannotated protein; Belongs to the peptidase S24 family. | Unannotated protein; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.613 |
CP523_07210 | CP523_01795 | GCA_900092375_01059 | GCA_900092375_02392 | Unannotated protein. | Unannotated protein. | 0.406 |
CP523_07210 | CP523_04895 | GCA_900092375_01059 | GCA_900092375_01697 | Unannotated protein. | Unannotated protein; Belongs to the peptidase S24 family. | 0.807 |
CP523_07210 | CP523_13815 | GCA_900092375_01059 | GCA_900092375_02059 | Unannotated protein. | Unannotated protein. | 0.937 |
CP523_07210 | dinB | GCA_900092375_01059 | GCA_900092375_00491 | Unannotated protein. | Unannotated protein; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII. | 0.496 |
CP523_07210 | polA | GCA_900092375_01059 | GCA_900092375_02081 | Unannotated protein. | Unannotated protein; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.827 |
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