Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CP523_00325 | CP523_03355 | GCA_900092375_00575 | GCA_900092375_02112 | Unannotated protein. | Unannotated protein. | 0.418 |
CP523_03355 | CP523_00325 | GCA_900092375_02112 | GCA_900092375_00575 | Unannotated protein. | Unannotated protein. | 0.418 |
CP523_03355 | CP523_03360 | GCA_900092375_02112 | GCA_900092375_02111 | Unannotated protein. | Unannotated protein; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | 0.550 |
CP523_03355 | dbpA | GCA_900092375_02112 | GCA_900092375_02113 | Unannotated protein. | Unannotated protein; DEAD-box RNA helicase involved in the assembly of the 50S ribosomal subunit. Has an RNA-dependent ATPase activity, which is specific for 23S rRNA, and a 3' to 5' RNA helicase activity that uses the energy of ATP hydrolysis to destabilize and unwind short rRNA duplexes. | 0.447 |
CP523_03355 | flgC | GCA_900092375_02112 | GCA_900092375_00442 | Unannotated protein. | Unannotated protein; Belongs to the flagella basal body rod proteins family. | 0.459 |
CP523_03355 | fliW | GCA_900092375_02112 | GCA_900092375_00945 | Unannotated protein. | Unannotated protein; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum. | 0.422 |
CP523_03355 | nifJ | GCA_900092375_02112 | GCA_900092375_00966 | Unannotated protein. | Unannotated protein. | 0.477 |
CP523_03360 | CP523_03355 | GCA_900092375_02111 | GCA_900092375_02112 | Unannotated protein; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | Unannotated protein. | 0.550 |
CP523_03360 | dbpA | GCA_900092375_02111 | GCA_900092375_02113 | Unannotated protein; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | Unannotated protein; DEAD-box RNA helicase involved in the assembly of the 50S ribosomal subunit. Has an RNA-dependent ATPase activity, which is specific for 23S rRNA, and a 3' to 5' RNA helicase activity that uses the energy of ATP hydrolysis to destabilize and unwind short rRNA duplexes. | 0.750 |
CP523_03360 | nifJ | GCA_900092375_02111 | GCA_900092375_00966 | Unannotated protein; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | Unannotated protein. | 0.761 |
dbpA | CP523_03355 | GCA_900092375_02113 | GCA_900092375_02112 | Unannotated protein; DEAD-box RNA helicase involved in the assembly of the 50S ribosomal subunit. Has an RNA-dependent ATPase activity, which is specific for 23S rRNA, and a 3' to 5' RNA helicase activity that uses the energy of ATP hydrolysis to destabilize and unwind short rRNA duplexes. | Unannotated protein. | 0.447 |
dbpA | CP523_03360 | GCA_900092375_02113 | GCA_900092375_02111 | Unannotated protein; DEAD-box RNA helicase involved in the assembly of the 50S ribosomal subunit. Has an RNA-dependent ATPase activity, which is specific for 23S rRNA, and a 3' to 5' RNA helicase activity that uses the energy of ATP hydrolysis to destabilize and unwind short rRNA duplexes. | Unannotated protein; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | 0.750 |
flgC | CP523_03355 | GCA_900092375_00442 | GCA_900092375_02112 | Unannotated protein; Belongs to the flagella basal body rod proteins family. | Unannotated protein. | 0.459 |
flgC | fliW | GCA_900092375_00442 | GCA_900092375_00945 | Unannotated protein; Belongs to the flagella basal body rod proteins family. | Unannotated protein; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum. | 0.792 |
fliW | CP523_03355 | GCA_900092375_00945 | GCA_900092375_02112 | Unannotated protein; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum. | Unannotated protein. | 0.422 |
fliW | flgC | GCA_900092375_00945 | GCA_900092375_00442 | Unannotated protein; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum. | Unannotated protein; Belongs to the flagella basal body rod proteins family. | 0.792 |
fliW | nifJ | GCA_900092375_00945 | GCA_900092375_00966 | Unannotated protein; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum. | Unannotated protein. | 0.800 |
nifJ | CP523_03355 | GCA_900092375_00966 | GCA_900092375_02112 | Unannotated protein. | Unannotated protein. | 0.477 |
nifJ | CP523_03360 | GCA_900092375_00966 | GCA_900092375_02111 | Unannotated protein. | Unannotated protein; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | 0.761 |
nifJ | fliW | GCA_900092375_00966 | GCA_900092375_00945 | Unannotated protein. | Unannotated protein; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum. | 0.800 |