Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CP523_06585 | CP523_06590 | GCA_900092375_02194 | GCA_900092375_02195 | Unannotated protein. | Unannotated protein. | 0.723 |
CP523_06585 | CP523_08765 | GCA_900092375_02194 | GCA_900092375_02694 | Unannotated protein. | Unannotated protein. | 0.578 |
CP523_06585 | metG | GCA_900092375_02194 | GCA_900092375_01598 | Unannotated protein. | Unannotated protein; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | 0.565 |
CP523_06585 | nifJ | GCA_900092375_02194 | GCA_900092375_00966 | Unannotated protein. | Unannotated protein. | 0.491 |
CP523_06585 | rsmI | GCA_900092375_02194 | GCA_900092375_02193 | Unannotated protein. | Unannotated protein; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA. | 0.947 |
CP523_06590 | CP523_06585 | GCA_900092375_02195 | GCA_900092375_02194 | Unannotated protein. | Unannotated protein. | 0.723 |
CP523_06590 | metG | GCA_900092375_02195 | GCA_900092375_01598 | Unannotated protein. | Unannotated protein; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | 0.486 |
CP523_06590 | rsmI | GCA_900092375_02195 | GCA_900092375_02193 | Unannotated protein. | Unannotated protein; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA. | 0.725 |
CP523_08765 | CP523_06585 | GCA_900092375_02694 | GCA_900092375_02194 | Unannotated protein. | Unannotated protein. | 0.578 |
CP523_08765 | metG | GCA_900092375_02694 | GCA_900092375_01598 | Unannotated protein. | Unannotated protein; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | 0.461 |
CP523_08765 | rsmI | GCA_900092375_02694 | GCA_900092375_02193 | Unannotated protein. | Unannotated protein; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA. | 0.530 |
metG | CP523_06585 | GCA_900092375_01598 | GCA_900092375_02194 | Unannotated protein; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | Unannotated protein. | 0.565 |
metG | CP523_06590 | GCA_900092375_01598 | GCA_900092375_02195 | Unannotated protein; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | Unannotated protein. | 0.486 |
metG | CP523_08765 | GCA_900092375_01598 | GCA_900092375_02694 | Unannotated protein; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | Unannotated protein. | 0.461 |
metG | nifJ | GCA_900092375_01598 | GCA_900092375_00966 | Unannotated protein; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | Unannotated protein. | 0.498 |
metG | rsmG | GCA_900092375_01598 | GCA_900092375_01134 | Unannotated protein; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | Unannotated protein; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family. | 0.520 |
metG | rsmI | GCA_900092375_01598 | GCA_900092375_02193 | Unannotated protein; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | Unannotated protein; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA. | 0.661 |
nifJ | CP523_06585 | GCA_900092375_00966 | GCA_900092375_02194 | Unannotated protein. | Unannotated protein. | 0.491 |
nifJ | metG | GCA_900092375_00966 | GCA_900092375_01598 | Unannotated protein. | Unannotated protein; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | 0.498 |
nifJ | nnrD | GCA_900092375_00966 | GCA_900092375_02182 | Unannotated protein. | Unannotated protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epim [...] | 0.709 |
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