Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CP523_03665 | GCA_900092375_01455 | GCA_900092375_02212 | GCA_900092375_01455 | Unannotated protein. | Unannotated protein. | 0.435 |
CP523_03665 | GCA_900092375_02680 | GCA_900092375_02212 | GCA_900092375_02680 | Unannotated protein. | Unannotated protein. | 0.584 |
GCA_900092375_01455 | CP523_03665 | GCA_900092375_01455 | GCA_900092375_02212 | Unannotated protein. | Unannotated protein. | 0.435 |
GCA_900092375_01455 | GCA_900092375_01456 | GCA_900092375_01455 | GCA_900092375_01456 | Unannotated protein. | Unannotated protein. | 0.986 |
GCA_900092375_01455 | GCA_900092375_02680 | GCA_900092375_01455 | GCA_900092375_02680 | Unannotated protein. | Unannotated protein. | 0.799 |
GCA_900092375_01455 | GCA_900092375_02681 | GCA_900092375_01455 | GCA_900092375_02681 | Unannotated protein. | Unannotated protein. | 0.691 |
GCA_900092375_01455 | glgA | GCA_900092375_01455 | GCA_900092375_00042 | Unannotated protein. | Unannotated protein; Synthesizes alpha-1,4-glucan chains using ADP-glucose. | 0.941 |
GCA_900092375_01455 | glgC | GCA_900092375_01455 | GCA_900092375_00040 | Unannotated protein. | Unannotated protein; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family. | 0.956 |
GCA_900092375_01455 | glgC-2 | GCA_900092375_01455 | GCA_900092375_01459 | Unannotated protein. | Unannotated protein; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family. | 0.975 |
GCA_900092375_01455 | glgD | GCA_900092375_01455 | GCA_900092375_00039 | Unannotated protein. | Unannotated protein. | 0.924 |
GCA_900092375_01455 | glgD-2 | GCA_900092375_01455 | GCA_900092375_01460 | Unannotated protein. | Unannotated protein. | 0.953 |
GCA_900092375_01456 | GCA_900092375_01455 | GCA_900092375_01456 | GCA_900092375_01455 | Unannotated protein. | Unannotated protein. | 0.986 |
GCA_900092375_01456 | GCA_900092375_02680 | GCA_900092375_01456 | GCA_900092375_02680 | Unannotated protein. | Unannotated protein. | 0.666 |
GCA_900092375_01456 | GCA_900092375_02681 | GCA_900092375_01456 | GCA_900092375_02681 | Unannotated protein. | Unannotated protein. | 0.615 |
GCA_900092375_01456 | glgC | GCA_900092375_01456 | GCA_900092375_00040 | Unannotated protein. | Unannotated protein; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family. | 0.932 |
GCA_900092375_01456 | glgC-2 | GCA_900092375_01456 | GCA_900092375_01459 | Unannotated protein. | Unannotated protein; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family. | 0.962 |
GCA_900092375_01456 | glgD | GCA_900092375_01456 | GCA_900092375_00039 | Unannotated protein. | Unannotated protein. | 0.941 |
GCA_900092375_01456 | glgD-2 | GCA_900092375_01456 | GCA_900092375_01460 | Unannotated protein. | Unannotated protein. | 0.960 |
GCA_900092375_02679 | GCA_900092375_02680 | GCA_900092375_02679 | GCA_900092375_02680 | Unannotated protein. | Unannotated protein. | 0.773 |
GCA_900092375_02679 | GCA_900092375_02681 | GCA_900092375_02679 | GCA_900092375_02681 | Unannotated protein. | Unannotated protein. | 0.732 |
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