STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GM44_4190Hypothetical protein. (259 aa)    
Predicted Functional Partners:
GM44_0805
Hypothetical protein.
  
     0.543
GM44_2105
Hypothetical protein.
 
  
  0.542
GM44_0085
Hypothetical protein; Belongs to the major facilitator superfamily.
   
 
 0.464
GM44_3750
Hypothetical protein.
 
  
  0.463
GM44_2190
acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
  0.450
GM44_4490
acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
  0.450
acsA
acetyl-CoA synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family.
   
 
  0.411
GM44_3705
Hypothetical protein.
    
  0.401
Your Current Organism:
actinobacterium acAMD2
NCBI taxonomy Id: 1504318
Other names: a. acAMD-2, actinobacterium acAMD-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.