STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GQ55_9G524500PPM-type phosphatase domain-containing protein. (621 aa)    
Predicted Functional Partners:
GQ55_2G319300
DAO domain-containing protein.
   
 0.692
GQ55_9G023800
Pyruvate dehydrogenase E1 component subunit alpha; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).
    
 0.684
GQ55_4G286800
Pyruvate dehydrogenase E1 component subunit alpha; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).
    
 0.684
GQ55_1G377500
Pyruvate dehydrogenase E1 component subunit alpha; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).
    
 0.684
GQ55_5G342600
Uncharacterized protein.
   
 0.564
GQ55_5G383900
Dihydrolipoyl dehydrogenase.
   
 0.564
GQ55_3G119300
Uncharacterized protein.
   
 0.564
GQ55_3G121800
Dihydrolipoyl dehydrogenase.
   
 0.564
GQ55_9G041800
Acetyltransferase component of pyruvate dehydrogenase complex; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).
   
 0.537
GQ55_6G197400
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex.
   
 0.537
Your Current Organism:
Panicum hallii
NCBI taxonomy Id: 1504633
Other names: P. hallii var. hallii, Panicum hallii var. hallii
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