STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GQ55_6G235100FAS1 domain-containing protein. (269 aa)    
Predicted Functional Partners:
GQ55_8G174400
Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family.
   
 
 0.912
GQ55_3G110600
Fibronectin type-III domain-containing protein.
  
 
  0.731
GQ55_3G424000
Fibronectin type-III domain-containing protein.
  
 
  0.718
GQ55_4G363100
Uncharacterized protein.
  
 0.715
GQ55_1G104700
Isochorismatase domain-containing protein.
  
 0.685
GQ55_9G207000
Uncharacterized protein; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family.
   
 0.683
GQ55_3G045100
Uncharacterized protein.
   
 0.683
GQ55_2G101500
Uncharacterized protein; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family.
   
 0.683
GQ55_1G036400
PHD_Oberon domain-containing protein.
  
 
  0.682
GQ55_7G030300
MaoC-like domain-containing protein.
  
 0.667
Your Current Organism:
Panicum hallii
NCBI taxonomy Id: 1504633
Other names: P. hallii var. hallii, Panicum hallii var. hallii
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