STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GQ55_4G328700DUF569 domain-containing protein. (287 aa)    
Predicted Functional Partners:
GQ55_2G439500
VQ domain-containing protein.
  
 
  0.587
GQ55_7G174600
Ipi1_N domain-containing protein.
    
 0.566
GQ55_4G127700
Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family.
  
 
   0.540
GQ55_2G237600
VQ domain-containing protein.
  
 
  0.535
GQ55_5G388000
Uncharacterized protein.
  
 
  0.527
GQ55_7G089500
GTD-binding domain-containing protein.
  
 
  0.518
GQ55_6G151900
Uncharacterized protein.
  
 
  0.516
GQ55_1G304400
Uncharacterized protein.
  
 
   0.510
GQ55_3G422500
Uncharacterized protein.
  
     0.504
GQ55_5G205800
HMA domain-containing protein.
  
     0.503
Your Current Organism:
Panicum hallii
NCBI taxonomy Id: 1504633
Other names: P. hallii var. hallii, Panicum hallii var. hallii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.