STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GQ55_3G020200Uncharacterized protein. (533 aa)    
Predicted Functional Partners:
GQ55_3G109800
Serine/threonine-protein phosphatase.
  
 
 0.762
GQ55_8G192500
Uncharacterized protein.
   
 0.698
GQ55_5G354900
Uncharacterized protein.
   
 0.695
GQ55_3G427700
Uncharacterized protein.
   
 0.683
GQ55_2G266700
Uncharacterized protein.
   
 0.683
GQ55_1G124200
Uncharacterized protein.
   
0.619
GQ55_5G169500
Uncharacterized protein.
   
 0.581
GQ55_3G194900
Uncharacterized protein.
   
 0.581
GQ55_9G499700
Uncharacterized protein.
   
0.573
GQ55_6G215100
Uncharacterized protein.
   
 0.572
Your Current Organism:
Panicum hallii
NCBI taxonomy Id: 1504633
Other names: P. hallii var. hallii, Panicum hallii var. hallii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.