STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GQ55_2G247400PMR5N domain-containing protein. (434 aa)    
Predicted Functional Partners:
GQ55_8G007900
Uncharacterized protein.
  
     0.516
GQ55_3G006800
Uncharacterized protein.
  
     0.514
GQ55_3G394500
Uncharacterized protein.
  
     0.508
GQ55_3G355000
Uncharacterized protein.
  
     0.499
GQ55_4G301700
WRC domain-containing protein.
  
     0.488
GQ55_3G266500
Uncharacterized protein.
  
     0.480
GQ55_3G332100
HMA domain-containing protein.
  
     0.480
GQ55_9G608900
Uncharacterized protein.
  
     0.478
GQ55_1G408100
WRC domain-containing protein.
  
     0.474
GQ55_9G476700
Nuclear pore protein.
  
     0.471
Your Current Organism:
Panicum hallii
NCBI taxonomy Id: 1504633
Other names: P. hallii var. hallii, Panicum hallii var. hallii
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.