STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GQ55_2G395200BHLH domain-containing protein. (377 aa)    
Predicted Functional Partners:
GQ55_3G283600
Uncharacterized protein.
   
 0.946
GQ55_2G038000
Uncharacterized protein.
   
 0.935
GQ55_7G322300
Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.918
GQ55_8G105800
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
 0.894
GQ55_7G139100
Exocyst complex component SEC5; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. Belongs to the SEC5 family.
    
 0.739
GQ55_6G145100
Sec8_exocyst domain-containing protein.
    
 0.725
GQ55_9G522200
Arf-GAP domain-containing protein.
    
 0.705
GQ55_3G109800
Serine/threonine-protein phosphatase.
   
 0.705
GQ55_9G157100
Sec3-PIP2_bind domain-containing protein.
    
 0.685
GQ55_8G098700
Sec3-PIP2_bind domain-containing protein.
    
 0.685
Your Current Organism:
Panicum hallii
NCBI taxonomy Id: 1504633
Other names: P. hallii var. hallii, Panicum hallii var. hallii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.