STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gene:199032097Inner membrane protein YbhQ. (333 aa)    
Predicted Functional Partners:
clsB-2
Cardiolipin synthetase; Catalyzes the phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol.
 
  
 0.900
gene:199032095
Endonuclease/Exonuclease/phosphatase family protein.
 
  
 0.897
gene:199032099
annotation not available
       0.574
CDS52864.1
Biotin synthase related domain containing protein.
       0.568
gene:199030168
Potassium efflux system KefA protein / Small-conductance mechanosensitive channel.
 
     0.538
CDS53704.1
Glucans biosynthesis glucosyltransferase H.
 
     0.537
CDS50640.1
Sodium-dependent phosphate transporter.
 
     0.533
gene:199033151
Permeases of the major facilitator superfamily.
  
     0.521
gene:199032944
Glucans biosynthesis protein G; Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs).
 
     0.508
CDS52904.1
Alkylated DNA repair protein AlkB.
  
     0.469
Your Current Organism:
Polaromonas sp. CG912
NCBI taxonomy Id: 1504672
Other names: P. sp. CG9_12, Polaromonas sp. CG9_12
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