STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJY51040.1Hydroxymethylglutaryl-CoA lyase; PFAM: pyruvate carboxyltransferase; KEGG: hmgL; hydroxymethylglutaryl-CoA lyase. (301 aa)    
Predicted Functional Partners:
AJY51038.1
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: enoyl-CoA hydratase/isomerase.
 0.996
AJY51037.1
Methylcrotonoyl-CoA carboxylase; PFAM: carboxyl transferase; KEGG: mccB; propionyl-CoA carboxylase.
 
 
 0.955
AJY51039.1
KEGG: accA; methylcrotonoyl-CoA carboxylase, biotin carboxylase subunit; SMART: biotin carboxylase domain protein; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding protein; biotin/lipoyl attachment domain-containing protein; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein.
  
 0.925
AJY50769.1
SMART: coenzyme A transferase; TIGRFAM: 3-oxoacid CoA-transferase, B subunit; PFAM: coenzyme A transferase; KEGG: scoB; CoA transferase subunit B.
  
 
 0.922
AJY50770.1
SMART: coenzyme A transferase; TIGRFAM: 3-oxoacid CoA-transferase, A subunit; PFAM: coenzyme A transferase; KEGG: CoA transferase, subunit A.
  
 
 0.921
AJY48675.1
TIGRFAM: beta-ketoadipyl CoA thiolase; acetyl-CoA acetyltransferase; PFAM: Thiolase domain-containing protein; KEGG: phaD; beta-ketoadipyl CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.917
AJY48695.1
PFAM: Thiolase domain-containing protein; KEGG: acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.917
AJY50230.1
KEGG: acetyl-CoA acetyltransferase; PFAM: Thiolase domain-containing protein; TIGRFAM: acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.917
fadA
3-ketoacyl-CoA thiolase; Catalyzes the final step of fatty acid oxidation in which acetyl-CoA is released and the CoA ester of a fatty acid two carbons shorter is formed.
  
 
 0.917
AJY52459.1
KEGG: phbA; acetyl-CoA acetyltransferase; PFAM: Thiolase domain-containing protein; TIGRFAM: acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.917
Your Current Organism:
Halomonas sp. KO116
NCBI taxonomy Id: 1504981
Other names: H. sp. KO116
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.