STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJY51887.1PFAM: Peptidase M75, Imelysin; KEGG: icmP; iron-regulated protein. (431 aa)    
Predicted Functional Partners:
AJY51886.1
PFAM: protein of unknown function DUF1111; KEGG: hypothetical protein.
 
    0.975
AJY51885.1
PFAM: Peptidase M75, Imelysin; KEGG: hypothetical protein.
 
  
 0.954
AJY51884.1
PFAM: Uncharacterized conserved protein UCP028101; KEGG: hypothetical protein.
 
    0.923
AJY49495.1
Hypothetical protein; KEGG: ABC transporter periplasmic protein.
  
    0.774
AJY51824.1
KEGG: nasA; nitrate reductase subunit alpha; SMART: molybdopterin oxidoreductase Fe4S4 region; PFAM: molybdopterin oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; molybdopterin oxidoreductase Fe4S4 region; molybdopterin dinucleotide-binding region; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
  
  
 0.529
AJY52211.1
KEGG: BFD-like (2Fe-2S)-binding protein; PFAM: BFD domain protein [2Fe-2S]-binding domain protein.
  
  
 0.527
AJY51888.1
Transcriptional regulator, ArgP, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding protein; TIGRFAM: transcriptional regulator, ArgP family; KEGG: iciA; LysR family transcriptional regulator.
       0.525
Your Current Organism:
Halomonas sp. KO116
NCBI taxonomy Id: 1504981
Other names: H. sp. KO116
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