STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJY52101.1Transcriptional regulator, GntR family with FCD sensor domain; SMART: regulatory protein GntR HTH; GntR domain protein; PFAM: GntR domain protein; regulatory protein GntR HTH; KEGG: transcriptional regulator. (241 aa)    
Predicted Functional Partners:
AJY52100.1
KEGG: histone deacetylase domain-containing protein 2; PFAM: Histone deacetylase domain.
       0.840
AJY51232.1
KEGG: GntR family transcriptional regulator; SMART: GntR domain protein; regulatory protein GntR HTH; PFAM: GntR domain protein; regulatory protein GntR HTH.
  
     0.770
AJY51296.1
Transcriptional regulator, GntR family with FCD sensor domain; SMART: regulatory protein GntR HTH; GntR domain protein; PFAM: GntR domain protein; regulatory protein GntR HTH; KEGG: ydfH; GntR family transcriptional regulator.
  
     0.766
AJY51836.1
GntR domain protein; KEGG: GntR family transcriptional regulator; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: GntR domain protein; regulatory protein GntR HTH.
  
  
 0.753
AJY52067.1
Transcriptional regulator, GntR family with FCD sensor domain; KEGG: ygaE; DNA-binding transcriptional regulator CsiR; SMART: GntR domain protein; regulatory protein GntR HTH; PFAM: GntR domain protein; regulatory protein GntR HTH.
  
     0.751
AJY49629.1
KEGG: GntR family transcriptional regulator; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: GntR domain protein; regulatory protein GntR HTH.
  
     0.746
AJY52102.1
PFAM: ABC-type transporter, periplasmic subunit; KEGG: gsiB; ABC transporter substrate binding protein.
 
     0.721
AJY50325.1
SMART: GntR domain protein; regulatory protein GntR HTH; PFAM: GntR domain protein; regulatory protein GntR HTH; KEGG: GntR family transcriptional regulator.
  
  
 0.682
AJY51280.1
Regulatory protein GntR HTH; KEGG: GntR family transcriptional regulator; PFAM: regulatory protein GntR HTH; GntR domain protein; SMART: regulatory protein GntR HTH; GntR domain protein.
  
  
 0.667
AJY49611.1
SMART: GntR domain protein; regulatory protein GntR HTH; PFAM: GntR domain protein; regulatory protein GntR HTH; KEGG: glcC; DNA-binding transcriptional regulator GlcC.
  
  
 0.661
Your Current Organism:
Halomonas sp. KO116
NCBI taxonomy Id: 1504981
Other names: H. sp. KO116
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