STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H477_0674Unannotated protein. (251 aa)    
Predicted Functional Partners:
H477_0672
Unannotated protein.
 
0.999
H477_0676
Unannotated protein.
 
 0.999
H477_2960
Unannotated protein.
 
 0.998
H477_0671
Unannotated protein; Belongs to the ABC transporter superfamily.
 
 0.996
H477_2203
Unannotated protein.
 
 0.979
H477_2200
Unannotated protein.
 
  
0.756
H477_0669
Unannotated protein.
       0.713
H477_0679
Unannotated protein.
       0.515
H477_4909
Unannotated protein.
   
    0.463
H477_1659
Unannotated protein.
   
    0.414
Your Current Organism:
Paeniclostridium sordellii
NCBI taxonomy Id: 1505
Other names: ATCC 9714, BCRC 10649, Bacillus oedematis sporogenes, Bacillus sordelli, CCRC 10649, CCRC:10649, CCUG 9284, CIP 103658, Clostridium sordellii, DSM 2141, JCM 3814, LMG 15708, LMG:15708, NCIMB 10717, NCMB:10717, P. sordellii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.