Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
H477_1027 | H477_3541 | GCA_001950115_02919 | GCA_001950115_00727 | Unannotated protein. | Unannotated protein. | 0.621 |
H477_1027 | H477_3553 | GCA_001950115_02919 | GCA_001950115_00720 | Unannotated protein. | Unannotated protein. | 0.726 |
H477_1027 | H477_3555 | GCA_001950115_02919 | GCA_001950115_00719 | Unannotated protein. | Unannotated protein. | 0.552 |
H477_1027 | H477_3556 | GCA_001950115_02919 | GCA_001950115_00718 | Unannotated protein. | Unannotated protein. | 0.727 |
H477_1027 | rlmN | GCA_001950115_02919 | GCA_001950115_02918 | Unannotated protein. | Unannotated protein; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs; Belongs to the radical SAM superfamily. RlmN family. | 0.982 |
H477_1027 | thiI | GCA_001950115_02919 | GCA_001950115_03101 | Unannotated protein. | Unannotated protein; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS. | 0.891 |
H477_3001 | H477_3553 | GCA_001950115_00667 | GCA_001950115_00720 | Unannotated protein; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family. | Unannotated protein. | 0.554 |
H477_3001 | H477_3555 | GCA_001950115_00667 | GCA_001950115_00719 | Unannotated protein; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family. | Unannotated protein. | 0.471 |
H477_3001 | rlmN | GCA_001950115_00667 | GCA_001950115_02918 | Unannotated protein; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family. | Unannotated protein; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs; Belongs to the radical SAM superfamily. RlmN family. | 0.678 |
H477_3541 | H477_1027 | GCA_001950115_00727 | GCA_001950115_02919 | Unannotated protein. | Unannotated protein. | 0.621 |
H477_3541 | H477_3548 | GCA_001950115_00727 | GCA_001950115_00723 | Unannotated protein. | Unannotated protein. | 0.540 |
H477_3541 | H477_3553 | GCA_001950115_00727 | GCA_001950115_00720 | Unannotated protein. | Unannotated protein. | 0.502 |
H477_3541 | H477_3555 | GCA_001950115_00727 | GCA_001950115_00719 | Unannotated protein. | Unannotated protein. | 0.442 |
H477_3541 | H477_3556 | GCA_001950115_00727 | GCA_001950115_00718 | Unannotated protein. | Unannotated protein. | 0.424 |
H477_3541 | rpsU | GCA_001950115_00727 | GCA_001950115_00722 | Unannotated protein. | Unannotated protein; Belongs to the bacterial ribosomal protein bS21 family. | 0.541 |
H477_3548 | H477_3541 | GCA_001950115_00723 | GCA_001950115_00727 | Unannotated protein. | Unannotated protein. | 0.540 |
H477_3548 | H477_3550 | GCA_001950115_00723 | GCA_001950115_00721 | Unannotated protein. | Unannotated protein. | 0.618 |
H477_3548 | H477_3553 | GCA_001950115_00723 | GCA_001950115_00720 | Unannotated protein. | Unannotated protein. | 0.584 |
H477_3548 | H477_3555 | GCA_001950115_00723 | GCA_001950115_00719 | Unannotated protein. | Unannotated protein. | 0.617 |
H477_3548 | H477_3556 | GCA_001950115_00723 | GCA_001950115_00718 | Unannotated protein. | Unannotated protein. | 0.572 |
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