STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H477_3545Unannotated protein. (78 aa)    
Predicted Functional Partners:
H477_3542
Unannotated protein.
 
   
 0.949
H477_4907
Unannotated protein.
 
  
 0.870
H477_3541
Unannotated protein.
       0.794
ybeY
Unannotated protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
       0.784
H477_5030
Unannotated protein.
  
     0.766
GCA_001950115_00394
Unannotated protein.
  
     0.751
H477_4966
Unannotated protein.
  
     0.717
H477_0977
Unannotated protein.
  
    0.715
H477_3539
Unannotated protein.
       0.699
H477_0146
Unannotated protein.
  
     0.675
Your Current Organism:
Paeniclostridium sordellii
NCBI taxonomy Id: 1505
Other names: ATCC 9714, BCRC 10649, Bacillus oedematis sporogenes, Bacillus sordelli, CCRC 10649, CCRC:10649, CCUG 9284, CIP 103658, Clostridium sordellii, DSM 2141, JCM 3814, LMG 15708, LMG:15708, NCIMB 10717, NCMB:10717, P. sordellii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.