STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
arcCUnannotated protein; Belongs to the carbamate kinase family. (310 aa)    
Predicted Functional Partners:
argF
Unannotated protein; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.
 
 
 0.994
H477_3245
Unannotated protein.
 
  
 0.963
H477_2807
Unannotated protein; Belongs to the glutamine synthetase family.
     
 0.911
H477_0218
Unannotated protein; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
     
 0.910
H477_5423
Unannotated protein; Belongs to the glutaminase family.
     
  0.900
glsA
Unannotated protein; Belongs to the glutaminase family.
     
  0.900
H477_2544
Unannotated protein.
 
 
 0.880
H477_0222
Unannotated protein; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
    
 0.834
carA
Unannotated protein.
     
 0.803
H477_5055
Unannotated protein; Belongs to the CarB family.
     
 0.801
Your Current Organism:
Paeniclostridium sordellii
NCBI taxonomy Id: 1505
Other names: ATCC 9714, BCRC 10649, Bacillus oedematis sporogenes, Bacillus sordelli, CCRC 10649, CCRC:10649, CCUG 9284, CIP 103658, Clostridium sordellii, DSM 2141, JCM 3814, LMG 15708, LMG:15708, NCIMB 10717, NCMB:10717, P. sordellii
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