STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H477_2412Unannotated protein. (67 aa)    
Predicted Functional Partners:
H477_3050
Unannotated protein.
  
 0.810
H477_0427
Unannotated protein.
  
  
 0.774
argS
Unannotated protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.684
H477_1071
Unannotated protein.
  
 0.671
asnS
Unannotated protein.
  
 0.664
H477_3601
Unannotated protein.
  
 0.664
H477_5004
Unannotated protein; Belongs to the class-II aminoacyl-tRNA synthetase family.
   
 0.658
gltX
Unannotated protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.655
H477_3650
Unannotated protein.
  
 0.655
proS
Unannotated protein; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). Belongs to the class-II aminoacyl-tRNA synthetase family. ProS type 1 subfamily.
  
 0.648
Your Current Organism:
Paeniclostridium sordellii
NCBI taxonomy Id: 1505
Other names: ATCC 9714, BCRC 10649, Bacillus oedematis sporogenes, Bacillus sordelli, CCRC 10649, CCRC:10649, CCUG 9284, CIP 103658, Clostridium sordellii, DSM 2141, JCM 3814, LMG 15708, LMG:15708, NCIMB 10717, NCMB:10717, P. sordellii
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