STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AYJ54_08065Uncharacterized protein. (144 aa)    
Predicted Functional Partners:
AYJ54_37965
Uncharacterized protein.
  
     0.603
AYJ54_02595
Autotransporter domain-containing protein.
  
     0.602
AYJ54_24545
OMP_b-brl domain-containing protein.
  
     0.576
AYJ54_34240
OMP_b-brl domain-containing protein.
  
     0.569
AYJ54_45795
OMP_b-brl domain-containing protein.
  
     0.567
AYJ54_14065
Uncharacterized protein.
  
     0.566
AYJ54_32345
Autotransporter.
  
     0.566
AYJ54_28965
Uncharacterized protein.
  
     0.534
AYJ54_04145
Probable membrane transporter protein.
  
     0.528
AYJ54_30590
Glucokinase.
  
     0.509
Your Current Organism:
Bradyrhizobium centrolobii
NCBI taxonomy Id: 1505087
Other names: B. centrolobii, Bradyrhizobium sp. BR 10245, Bradyrhizobium sp. BR 10290, Bradyrhizobium sp. BR 10351, HAMBI:3597, strain BR 10245
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.