STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AYJ54_08085Dienelactone hydrolase. (295 aa)    
Predicted Functional Partners:
AYJ54_08090
Invasion protein B.
     0.814
AYJ54_08080
Transporter.
 
     0.789
AYJ54_22035
Dienelactone hydrolase.
  
     0.759
AYJ54_42120
Uncharacterized protein.
  
     0.696
AYJ54_10300
Maleylacetate reductase.
  
 
 0.687
AYJ54_29285
DNA-binding protein.
  
    0.679
AYJ54_23300
Phosphoglycerol transferase.
  
     0.634
AYJ54_45925
Feruloyl esterase.
 
  
  0.621
AYJ54_24940
Alcohol dehydrogenase.
  
 
 0.616
AYJ54_27960
Alcohol dehydrogenase.
  
 
 0.616
Your Current Organism:
Bradyrhizobium centrolobii
NCBI taxonomy Id: 1505087
Other names: B. centrolobii, Bradyrhizobium sp. BR 10245, Bradyrhizobium sp. BR 10290, Bradyrhizobium sp. BR 10351, HAMBI:3597, strain BR 10245
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.