STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AYJ54_08090Invasion protein B. (194 aa)    
Predicted Functional Partners:
AYJ54_08085
Dienelactone hydrolase.
     0.814
AYJ54_42185
Uncharacterized protein.
  
     0.729
AYJ54_26775
Flagellar hook-length control protein FliK.
  
     0.726
AYJ54_35610
Porin; Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane.
  
     0.726
AYJ54_33500
Porin; Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane.
  
     0.690
AYJ54_35950
Porin; Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane.
  
     0.690
AYJ54_08080
Transporter.
       0.682
AYJ54_31070
PG_binding_1 domain-containing protein.
  
     0.674
AYJ54_01130
Transcriptional regulator.
  
     0.666
AYJ54_30685
Uncharacterized protein.
  
     0.662
Your Current Organism:
Bradyrhizobium centrolobii
NCBI taxonomy Id: 1505087
Other names: B. centrolobii, Bradyrhizobium sp. BR 10245, Bradyrhizobium sp. BR 10290, Bradyrhizobium sp. BR 10351, HAMBI:3597, strain BR 10245
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.