Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 annotation | node2 annotation | score |
| AYJ54_01510 | AYJ54_17030 | Cysteine desulfurase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine. | Thioredoxin reductase. | 0.906 |
| AYJ54_01510 | AYJ54_19780 | Cysteine desulfurase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine. | annotation not available | 0.812 |
| AYJ54_01510 | AYJ54_23505 | Cysteine desulfurase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine. | Methionine gamma-lyase. | 0.518 |
| AYJ54_05175 | AYJ54_15615 | Alkyl hydroperoxide reductase. | Thioredoxin; Belongs to the thioredoxin family. | 0.824 |
| AYJ54_05175 | AYJ54_17030 | Alkyl hydroperoxide reductase. | Thioredoxin reductase. | 0.936 |
| AYJ54_05175 | AYJ54_19780 | Alkyl hydroperoxide reductase. | annotation not available | 0.962 |
| AYJ54_05175 | AYJ54_22670 | Alkyl hydroperoxide reductase. | Glutamate synthase subunit alpha. | 0.472 |
| AYJ54_05175 | AYJ54_24165 | Alkyl hydroperoxide reductase. | Hydrogenase accessory protein. | 0.785 |
| AYJ54_05175 | AYJ54_27635 | Alkyl hydroperoxide reductase. | Co-chaperone YbbN. | 0.810 |
| AYJ54_05175 | AYJ54_28885 | Alkyl hydroperoxide reductase. | Cytochrome C biogenesis protein. | 0.974 |
| AYJ54_15615 | AYJ54_05175 | Thioredoxin; Belongs to the thioredoxin family. | Alkyl hydroperoxide reductase. | 0.824 |
| AYJ54_15615 | AYJ54_17030 | Thioredoxin; Belongs to the thioredoxin family. | Thioredoxin reductase. | 0.956 |
| AYJ54_15615 | AYJ54_19780 | Thioredoxin; Belongs to the thioredoxin family. | annotation not available | 0.972 |
| AYJ54_15615 | AYJ54_22670 | Thioredoxin; Belongs to the thioredoxin family. | Glutamate synthase subunit alpha. | 0.901 |
| AYJ54_15615 | AYJ54_23505 | Thioredoxin; Belongs to the thioredoxin family. | Methionine gamma-lyase. | 0.417 |
| AYJ54_15615 | AYJ54_27635 | Thioredoxin; Belongs to the thioredoxin family. | Co-chaperone YbbN. | 0.460 |
| AYJ54_15615 | AYJ54_28885 | Thioredoxin; Belongs to the thioredoxin family. | Cytochrome C biogenesis protein. | 0.453 |
| AYJ54_15615 | AYJ54_42420 | Thioredoxin; Belongs to the thioredoxin family. | Peroxidase. | 0.813 |
| AYJ54_17030 | AYJ54_01510 | Thioredoxin reductase. | Cysteine desulfurase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine. | 0.906 |
| AYJ54_17030 | AYJ54_05175 | Thioredoxin reductase. | Alkyl hydroperoxide reductase. | 0.936 |
page 1 of 4